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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs280460 chr5:156040934 C/G 0.00012 406 16.67 14.43 10.7 KM Plot
LGG rs280461 chr5:156043207 A/G 2.6E-5 407 16.67 14.43 11.17 KM Plot
LGG rs280462 chr5:156043586 G/A 1.64E-5 407 16.45 14.37 10.53 KM Plot
LGG rs280463 chr5:156044745 A/C 2.01E-5 403 16.75 14.43 11.17 KM Plot
LGG rs280464 chr5:156046064 A/C 2.6E-5 407 16.67 14.43 11.17 KM Plot
LGG rs280465 chr5:156046597 G/C 2.6E-5 407 16.67 14.43 11.17 KM Plot
LGG rs280466 chr5:156047273 G/A 2.7E-5 406 16.67 14.4 11.17 KM Plot
LGG rs280468 chr5:156024607 C/A 1.63E-5 407 16.6 14.12 10.53 KM Plot
LGG rs280469 chr5:156024618 G/A 1.84E-5 407 15.6 15.17 11.63 KM Plot
LGG rs280470 chr5:156024683 A/T 0.000116 407 10.7 14.12 16.75 KM Plot
LGG rs280471 chr5:156025506 C/T 1.84E-5 407 15.6 15.17 11.63 KM Plot
LGG rs280472 chr5:156027314 A/T 2.6E-5 407 16.73 14.4 11.17 KM Plot
LGG rs280473 chr5:156029738 C/T 2.6E-5 407 16.67 14.43 11.17 KM Plot
LGG rs280474 chr5:156030186 A/G 4.62E-5 407 16.67 14.37 10.53 KM Plot
LGG rs280475 chr5:156015955 C/T 1.98E-5 407 15.38 15.58 9.43 KM Plot